Publications

You can also find my articles on my Google Scholar profile.

Journal Articles

CPIExtract: A software package to collect and harmonize small molecule and protein interactions

Published in (Submission, waiting for review) Bioinformatics Journal, 2025

Developed a pipeline to extract Compound-Protein Interaction (CPI) data from multiple sources and integrate them, to create augmented dataset to improve the performance of machine learning models.

Recommended citation: https://www.biorxiv.org/content/10.1101/2024.07.03.601957v1.
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Conference Papers

Relational Causal Discovery with Latent Confounders

Published in Conference on Uncertainty in Artificial Intelligence (UAI), 2025

Introduced RelFCI, an algorithm extending FCI to relational data with latent confounders and non-i.i.d. assumptions.

Recommended citation: Negro, Matteo, Andrea Piras et al. "Relational Causal Discovery with Latent Confounders." The 41st Conference on Uncertainty in Artificial Intelligence.
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